Source code for parselglossy.utils

# -*- coding: utf-8 -*-
#
# parselglossy -- Generic input parsing library, speaking in tongues
# Copyright (C) 2020 Roberto Di Remigio, Radovan Bast, and contributors.
#
# This file is part of parselglossy.
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included in
# all copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
# SOFTWARE.
#
# For information on the complete list of contributors to the
# parselglossy library, see: <http://parselglossy.readthedocs.io/>
#

"""Common utilities."""

import json
from functools import reduce
from pathlib import Path
from shutil import copy
from typing import Any, Dict, List, Optional, Tuple, Union

JSONDict = Dict[str, Any]


[docs]class ComplexEncoder(json.JSONEncoder): """JSON encoder for complex numbers."""
[docs] def default(self, obj): if isinstance(obj, complex): return {"__complex__": [obj.real, obj.imag]} # Let the base class default method raise the TypeError return json.JSONEncoder.default(self, obj)
[docs]def as_complex(dct): """JSON decoder for complex numbers.""" if "__complex__" in dct: return complex(dct["__complex__"][0], dct["__complex__"][1]) return dct
[docs]def location_in_dict(*, address: Tuple, dict_name: str = "user") -> str: """Convert tuple of keys of a ``JSONDict`` to its representation in code. For example, given ``("a", "b", "c")`` returns the string ``user['a']['b']['c']``. Parameters ---------- address : Tuple[str] dict_name : str Returns ------- where : str """ return reduce(lambda x, y: x + f"['{y}']", address, "user")
[docs]def path_resolver(f: Union[str, Path], *, touch: bool = True) -> Path: """Resolve a path. Parameters ---------- f : Union[str, Path] File whose path needs to be resolved. touch : bool Create file is not already existent. Default: True Returns ------- path : Path File as a ``Path`` object. Notes ----- The file will be created if not already existent. """ path = Path(f) if isinstance(f, str) else f if not path.exists() and touch: path.touch() return path.resolve()
[docs]def default_outfile(*, fname: Union[str, Path], suffix: str) -> str: """Default name for output file. Parameters ---------- fname : Union[str, Path] Name to use as stencil. suffix : str Suffix to append. Returns ------- The name of the output file. """ fname = Path(fname) if isinstance(fname, str) else fname base = fname.name return base.rsplit(".", 1)[0] + suffix
[docs]def copier(src: Path, dest: Path) -> None: """Copy file, ensuring it can be overwritten.""" # copy file _ = copy(src, dest, follow_symlinks=True) # Ensure we can overwrite, by doing a chmod uga+rw Path(_).chmod(0o644)
[docs]def folder_permissions(folder: Path) -> None: """Recursively set permissions with chmod uga+rw""" folder.chmod(0o755) for x in folder.iterdir(): if x.is_dir(): folder_permissions(x) else: x.chmod(0o644)
[docs]def flatten_list(nested_list: List[Any]) -> List[Any]: """Flattens a nested list into a flat list. Parameters ---------- nested_list : List[Any] Nested list Returns ------- List[Any] Flattened list """ if nested_list == []: return nested_list if isinstance(nested_list[0], list): return flatten_list(nested_list[0]) + flatten_list(nested_list[1:]) return nested_list[:1] + flatten_list(nested_list[1:])
[docs]def dict_to_list(d: JSONDict) -> List[Any]: """Converts a nested dictionary to a nested list. Parameters ---------- d : JSONDict Nested dictionary Returns ------- list: List[Any] Flattened list """ nested_list = [] for k, v in d.items(): if isinstance(v, dict): nested_list.append([k, dict_to_list(v)]) else: nested_list.append([k, v]) return nested_list
[docs]def nested_get(d: JSONDict, *ks: str) -> Optional[Any]: """Get value from a nested dictionary. Parameters ---------- d : JSONDict ks : str Returns ------- v : Optional[Any] Notes ----- Adapted from: https://stackoverflow.com/a/40675868/2528668 """ def _func(x: JSONDict, k: str) -> Optional[JSONDict]: return x.get(k, None) if isinstance(x, dict) else None return reduce(_func, ks, d)
[docs]def nested_set(d: JSONDict, ks: Tuple[Any, ...], v: Any) -> None: """Set value in nested dictionary. Parameters ---------- d : JSONDict ks : Tuple[str] v : Any Notes ----- Adapted from: https://stackoverflow.com/a/13688108/2528668 """ for k in ks[:-1]: d = d.setdefault(k, {}) d[ks[-1]] = v